Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798039.1_cds_XP_016458116.1_5140
CDS Infomation

[gene=LOC107781836] [db_xref=GeneID:107781836] [protein=MACPF domain-containing protein At1g14780-like] [protein_id=XP_016458116.1] [location=join(18151..18393,18484..18725,20993..21194,21519..21593,22708..22908,23609..23707,23962..24026,25254..25860)] [gbkey=CDS]
Sequence

ATGAGCAATATTAATAGTATTGTAGAGAAAGCTATCGACAGCCTCGGAAAAGGCTTCGAT
TTGACCTGCGATTTTCGACTAAAGTATTGTAAAGGAGACGAAAGACTTGTGTTGCTCAAT
GAAACTGTCACAAAGGAGATCATTGTACCTGGTTTTGGAGCTTTTAATAATGTCCCTGTT
GATATTAAATGTGATAAAGGCGATCGAGTTCGATTTCAATCTGATATTCTTACTTTTAAT
CAGATGTCTGAATTTATGAACAGGAAAAGTTCAGTGGCAGGGAAAATACCATCAGGATTG
TTTAATTCAATGTTTGGGTTTCAGAGTGGTTCATGGGCAACTGATGCAGCAAATACAAAC
TATTTAGGGCTTGATGGTTACTTCATTATATTGTTTGATGTTCATATTGATAGAAGTCCT
CTTCTTTTGTCTGATCAAGTTATAAATGATGTTCCTTCAACTTGGGATCCTGCTGCTCTT
GCAAGGTTCATAGAGAAATATGGTACCCACATAATTGTGGGGTTGAGTATAGGAGGACAA
GATGTGGTCCTAGTTAGGCAAGACAAATTATCCAACATGGAACCATCACAACTCAAGGAC
CAATTGGATGAACTTGGTGATCAGTTATTCACTGGCATTTGTAACTTCTCTCCACACCAA
TGCAAAACACGAGAACAAAAGCATAAGGCTCTAGAGGCATTCAATGTTTTTGATCCACAG
CCCAATATCTTCAGCGACTTCCCATCAGCTACCACAAAAGATGGAGTAACAGTGATATGT
TCAAAAAGAGGTGGAGATTTAACAGCAAACACACACAGTGAATGGCTTCTAACAGTAGCT
TCAAAGCCAGATGCAATTGGCTTCAACTTCATTCCCATCACTTCCCTTCTCAAAGCTGTT
CCTGGCATGGGTTTCTTATCACATGCTATCAACCTTTATCTTCGATGTAAGTCTATTATA
TTCAGTGATCTTCCTTTAGGCCCAACTACAAATAGGTCCATTCGACCTCCAGCCCTTCAT
TTCAATTTGATAGGCCCCAAGCTTTACGTAAACCCAACTCAGGTAATTGTTGGAAAAACA
CCAGTAACTGGTATGCGACTTTATCTTGAAGGGGTCAAGTGTGACAGGCTGGCCATACAT
CTTCAACACTTGCTAAATACTCCAGTACTCCTTCAAGATAAAATAGATGAACCATTAACA
TGGCGCGGATCCGAAGATGTACCCGATCATGATCGATACTCTGAAGCCATTCAATGGAAA
AAATTCTCACACGTATGCACAGCCCCTGTAAAGTACGATCCAAAATGGACATCCTCAGGG
GAAGACTTGAGCTTCATTGTCACAGGAGCTCAACTCCACGTTAAAAAACACGAAACCAAG
AGCATTTTACATCTTAGACTTTTATATTCCAAGGTTTCCAAGTCTTGCATTGTGCAATCT
CAATGGATGCAATGTGACTCAGAAAGTTGTACAAAGTCAGGTAGTTTTGTGTCGGCCGGT
TTATCGGAGAAGGAGAAGACGCCGCTAGTGGTGGTGGATTCCGGCGTGTATCCGACGGGT
CCACCGGTGCCACTGCAAACGCAAAAGCTACTAAAATTTGTGGATACAACACAGTTATGT
AGAGGGCCATTGAATAGTCCAGGGCATTGGTTAGTCACTGGGGCTAAATTGGACTTGGAA
AGAGGCAAAATTTGCTTGCGTGTTAAATTCTCCTTGTTAAATATGTCTTCTTAA

Peptide Sequence

PEP ID

XP_016458116.1
PEP Infomation

PREDICTED: MACPF domain-containing protein At1g14780-like [Nicotiana tabacum]
Sequence

MSNINSIVEKAIDSLGKGFDLTCDFRLKYCKGDERLVLLNETVTKEIIVPGFGAFNNVPV
DIKCDKGDRVRFQSDILTFNQMSEFMNRKSSVAGKIPSGLFNSMFGFQSGSWATDAANTN
YLGLDGYFIILFDVHIDRSPLLLSDQVINDVPSTWDPAALARFIEKYGTHIIVGLSIGGQ
DVVLVRQDKLSNMEPSQLKDQLDELGDQLFTGICNFSPHQCKTREQKHKALEAFNVFDPQ
PNIFSDFPSATTKDGVTVICSKRGGDLTANTHSEWLLTVASKPDAIGFNFIPITSLLKAV
PGMGFLSHAINLYLRCKSIIFSDLPLGPTTNRSIRPPALHFNLIGPKLYVNPTQVIVGKT
PVTGMRLYLEGVKCDRLAIHLQHLLNTPVLLQDKIDEPLTWRGSEDVPDHDRYSEAIQWK
KFSHVCTAPVKYDPKWTSSGEDLSFIVTGAQLHVKKHETKSILHLRLLYSKVSKSCIVQS
QWMQCDSESCTKSGSFVSAGLSEKEKTPLVVVDSGVYPTGPPVPLQTQKLLKFVDTTQLC
RGPLNSPGHWLVTGAKLDLERGKICLRVKFSLLNMSS

Transcript Sequence

Gene sequence data has not been registered.